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dockerasmus 0.1.1 documentation
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A
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C
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D
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F
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I
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L
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M
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N
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O
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P
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R
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S
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T
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V
A
apply_transformation_matrix() (in module dockerasmus.spatial)
Atom (class in dockerasmus.pdb)
atom() (dockerasmus.pdb.Protein method)
atom_charges() (dockerasmus.pdb.Protein method)
atom_positions() (dockerasmus.pdb.Protein method)
atom_pwd() (dockerasmus.pdb.Protein method)
atom_radius() (dockerasmus.pdb.Protein method)
C
Chain (class in dockerasmus.pdb)
charge (dockerasmus.pdb.Atom attribute)
charge() (in module dockerasmus.score.requirements)
components (ScoringFunction attribute)
contact_map() (dockerasmus.pdb.Protein method)
copy() (dockerasmus.pdb.Protein method)
Coulomb (class in dockerasmus.score.components)
D
distance() (in module dockerasmus.score.requirements)
distance_to() (dockerasmus.pdb.Atom method)
(dockerasmus.pdb.Residue method)
dockerasmus.score.requirements (module)
dockerasmus.spatial (module)
F
Fabiola (class in dockerasmus.score.components)
from_pdb() (dockerasmus.pdb.Protein class method)
from_pdb_file() (dockerasmus.pdb.Protein class method)
I
interface() (dockerasmus.pdb.Protein method)
iteratoms() (dockerasmus.pdb.Protein method)
L
LennardJones (class in dockerasmus.score.components)
M
mass (dockerasmus.pdb.Atom attribute)
(dockerasmus.pdb.Chain attribute)
(dockerasmus.pdb.Protein attribute)
(dockerasmus.pdb.Residue attribute)
mass_center (dockerasmus.pdb.Protein attribute)
(dockerasmus.pdb.Residue attribute)
N
nearest() (dockerasmus.pdb.Atom method)
nearest_atom() (dockerasmus.pdb.Protein method)
O
ocn_atoms_positions() (in module dockerasmus.score.requirements)
P
pos (dockerasmus.pdb.Atom attribute)
potential_well_depth() (in module dockerasmus.score.requirements)
Protein (class in dockerasmus.pdb)
pwd (dockerasmus.pdb.Atom attribute)
R
radius (dockerasmus.pdb.Atom attribute)
(dockerasmus.pdb.Protein attribute)
requirements (ScoringFunction attribute)
Residue (class in dockerasmus.pdb)
residue() (dockerasmus.pdb.Protein method)
rmsd() (dockerasmus.pdb.Protein method)
(dockerasmus.pdb.Residue method)
RotationMatrix() (in module dockerasmus.spatial)
S
ScoringFunction (class in dockerasmus.score)
ScreenedCoulomb (class in dockerasmus.score.components)
T
transform_cartesian() (in module dockerasmus.spatial)
transform_spherical() (in module dockerasmus.spatial)
TranslationMatrix() (in module dockerasmus.spatial)
V
vdw_radius() (in module dockerasmus.score.requirements)